BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026F03LP1|AL428576
(892 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1148 1744 0.0
>3x_Contig1148
Length = 4745
Score = 1744 bits (877), Expect = 0.0
Identities = 888/893 (99%), Gaps = 1/893 (0%)
Strand = Plus / Plus
Query: 1 tcaccatgttaaagaaggagactaagagatgcattgacttcttgcagcatccagttgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2215 tcaccatgttaaagaaggagactaagagatgcattgacttcttgcagcatccagttgcca 2274
Query: 61 ctagggatgaaaatgtttctactattgcttcctatattatggatgtatactacaaaccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2275 ctagggatgaaaatgtttctactattgcttcctatattatggatgtatactacaaaccaa 2334
Query: 121 attatgacactttggcacaactcttgttgttaaagacgggcaacaattattacgaaagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2335 attatgacactttggcacaactcttgttgttaaagacgggcaacaattattacgaaagag 2394
Query: 181 ttttccaaagccaagtggaacttgccattgaaaagcttggtctacaagaaagatagaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2395 ttttccaaagccaagtggaacttgccattgaaaagcttggtctacaagaaagatagaaat 2454
Query: 241 aggtgtcgtcctgaaacttaattcaagccacgtatagtaactatgtaatttgctaactca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2455 aggtgtcgtcctgaaacttaattcaagccacgtatagtaactatgtaatttgctaactca 2514
Query: 301 gatctaatcaaaacgaatactaagtgcaaagctttcacgtcaatgagaggttttatttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2515 gatctaatcaaaacgaatactaagtgcaaagctttcacgtcaatgagaggttttatttta 2574
Query: 361 tggacatctcaggtttttatacataagttaagttatataaaggtacgaggggtgggatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2575 tggacatctcaggtttttatacataagttaagttatataaaggtacgaggggtgggatat 2634
Query: 421 taatatgttctatttcattttacgaaactttaacgtattggttgcmgtatgatacaaaga 480
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2635 taatatgttctatttcattttacgaaactttaacgtattggttgcagtatgatacaaaga 2694
Query: 481 cagaacgatcagttaatgatattmattttgcgagttcattatcgtaatggaataataaga 540
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2695 cagaacgatcagttaatgatattaattttgcgagttcattatcgtaatggaataataaga 2754
Query: 541 matgaaacgttttcaaatttgtttatttacaccaattcaacataattggctgggaaaata 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2755 aatgaaacgttttcaaatttgtttatttacaccaattcaacataattggctgggaaaata 2814
Query: 601 ccttctttaccattgactcttcctgtccaccagtcgtcttgcgattcagatttcttgata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2815 ccttctttaccattgactcttcctgtccaccagtcgtcttgcgattcagatttcttgata 2874
Query: 661 attgagataacgtcgccctttctgaacggcaagtctccgctttcttcacctttgaaagtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2875 attgagataacgtcgccctttctgaacggcaagtctccgctttcttcacctttgaaagtg 2934
Query: 721 taaagagctacagcctttggtgcaccggaatttctagctggagagttagcagaagagtta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2935 taaagagctacagcctttggtgcaccggaatttctagctggagagttagcagaagagtta 2994
Query: 781 cctcttgggctaccacgggagaacgaactggatccaaagtctggtttttccgattttrgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2995 cctcttgggctaccacgggagaacgaactggatccaaagtctggtttttccgattttggt 3054
Query: 841 cttgaaggacca-ctctagcgttccttgtattgaggtttgttctttcgaatct 892
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3055 cttgaaggaccacctctagcgttccttgtattgaggtttgttctttcgaatct 3107
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6576
Number of Sequences: 1807
Number of extensions: 6576
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 892
length of database: 10,358,551
effective HSP length: 16
effective length of query: 876
effective length of database: 10,329,639
effective search space: 9048763764
effective search space used: 9048763764
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)